Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814667.1_cds_XP_016498025.1_12099
CDS Infomation

[gene=LOC107816791] [db_xref=GeneID:107816791] [protein=lysine-specific histone demethylase 1 homolog 3-like] [protein_id=XP_016498025.1] [location=complement(join(37644..38046,38167..38212,38356..39117,39422..39638))] [gbkey=CDS]
Sequence

ATGCTTTTCCCATATGTGTTCTGGGGCACTGATCTCGATACCTTTGGGCATCTTACTGAT
AATTCTAGTAGCAGGGGTGAATTCTTTCTGTTCTATAGCTATGCAACTGTTGCTGGTGGT
CCCTTATTGTTAGCTCTAGTTGCTGGAGAAGCTGCACACAAGTTTGAGACCATGCCTCCG
ACCAACGCAGTGACAAAAGTTCTTCAAATTCTAAAAGGTATATATGAACCGCAAGGTATT
GAAGTGCCGGAGCCGATCCAAACTGTCTGTACAAGATGGGGAAGTGATCCTTTCAGCTTG
GGTTCTTACTCTAATGTTGCAGTAGGGGCATCAGGAGATGACTATGATATTTTAGCAGAA
AGTGTGGGCGATGGCAGACTTTTCTTTGCTGGCGAGGCCACTAATAGGCGCTATCCAGCC
ACTATGCACGGAGCTTTTCTTAGTGGGCTTAGAGAAGCTGCGAATATGGCCCACCATGCT
AAGCTTAGAACCATGAGTTTGAAGGTTGAGAAAAAGCCATCAAGGAATGCTTATTCTTAT
GCTTCTGTTCTGGCGGATTTATTTAGGGAGCCAGACTTGGAATTTGGTAGCTTTTCTATA
ATTTTCGCTAGAAAGAGTTCTGATCTCGAGTCACCGGCAATTTTGAGGGTGACTTTCAGT
GGAACCCAAACGAGGAGTCATGATGGGATAAGGCCTAATCGACATCTTTCTAACAAGTTA
CTCTTTCAGCAGCTTCAGTCCCACTTCAATAACCAGCATGAGCTTCACGTTTATGCCTTG
TTATCCAAGCAACAAGCCCTTGAGCTTAGAGAGGTCAGAGGTGGTGATCAGATGAGGCTG
AATTTCCTTTCTGAGAAGCTTGGGGTGAAACTGGTTGGTAGAAAAGGTTTGGGTCCATTG
GTTGATTCTATAATTGCCTCAATTAAGGCTGAGAGAGGCAGGCGTAAACCTGGGTCCAGG
TGTCTTACACTTAAATCTGGTGTCATGAAGTCAAAAGCCACCACTCTCAGGCAGAAAATA
GTTCGAAAGGCTAAAATAGTAGGGGTAGGCAATAGAACCACTTCTTCCACTGCAGAGAGC
AGCAGGATTAAAGCAGTTGGCAACAGCTCTACCTCGATCCCTCCAACAAATGTTACTTTG
GAATCTAAACCAGTTTGCACTATTGAATCTATAGCTTCTCCAAGTTTGAATATTGGTGTA
AATGACAACACGGGGTCAAATTCAGTGGGTAGTAGTTACCTATATCTGCTTCCGAATGCA
GGCATTGGTGATAAGTTAGAGAGTAATATTGGTAATTCTACCCCTCCCTTTTTGGATGCT
GGAGAAAAGACAGCAAGCAATATTAATGGCTCTATTTATGCCCAGAGTACATATGATGAT
AGCACGAATACATGTGCTCCGCCTCCCGGTGGAAATTCAGCTAGTTAG

Peptide Sequence

PEP ID

XP_016498025.1
PEP Infomation

PREDICTED: lysine-specific histone demethylase 1 homolog 3-like [Nicotiana tabacum]
Sequence

MLFPYVFWGTDLDTFGHLTDNSSSRGEFFLFYSYATVAGGPLLLALVAGEAAHKFETMPP
TNAVTKVLQILKGIYEPQGIEVPEPIQTVCTRWGSDPFSLGSYSNVAVGASGDDYDILAE
SVGDGRLFFAGEATNRRYPATMHGAFLSGLREAANMAHHAKLRTMSLKVEKKPSRNAYSY
ASVLADLFREPDLEFGSFSIIFARKSSDLESPAILRVTFSGTQTRSHDGIRPNRHLSNKL
LFQQLQSHFNNQHELHVYALLSKQQALELREVRGGDQMRLNFLSEKLGVKLVGRKGLGPL
VDSIIASIKAERGRRKPGSRCLTLKSGVMKSKATTLRQKIVRKAKIVGVGNRTTSSTAES
SRIKAVGNSSTSIPPTNVTLESKPVCTIESIASPSLNIGVNDNTGSNSVGSSYLYLLPNA
GIGDKLESNIGNSTPPFLDAGEKTASNINGSIYAQSTYDDSTNTCAPPPGGNSAS

Transcript Sequence

Gene sequence data has not been registered.